Sequencing data
49 files · not stored in the system — location/size only
| Type | Path | Size | Reference | Extract | Sample | Patient | Run | Created |
|---|---|---|---|---|---|---|---|---|
| cram | /data/sequencing/Vellun_shippaus/extract_52.cram | 4.8 GB | GRCh38 | #52 (DNA) | HGSC0022_diagnosis_plasma | HGSC0022 | Vellun shippaus — sequencing run | 7/22/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_52_R2.fastq.gz | 6.2 GB | — | #52 (DNA) | HGSC0022_diagnosis_plasma | HGSC0022 | Vellun shippaus — sequencing run | 7/2/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_52_R1.fastq.gz | 5.1 GB | — | #52 (DNA) | HGSC0022_diagnosis_plasma | HGSC0022 | Vellun shippaus — sequencing run | 6/18/2026 |
| cram | /data/sequencing/Vellun_shippaus/extract_46.cram | 4.8 GB | GRCh38 | #46 (DNA) | HGSC0305_diagnosis_ovary | HGSC0305 | Vellun shippaus — sequencing run | 7/6/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_46_R2.fastq.gz | 5.9 GB | — | #46 (DNA) | HGSC0305_diagnosis_ovary | HGSC0305 | Vellun shippaus — sequencing run | 7/1/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_46_R1.fastq.gz | 4.1 GB | — | #46 (DNA) | HGSC0305_diagnosis_ovary | HGSC0305 | Vellun shippaus — sequencing run | 6/25/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_34_R2.fastq.gz | 5.7 GB | — | #34 (DNA) | HGSC0127_recurrence2_peritoneum | HGSC0127 | Vellun shippaus — sequencing run | 7/11/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_34_R1.fastq.gz | 6.4 GB | — | #34 (DNA) | HGSC0127_recurrence2_peritoneum | HGSC0127 | Vellun shippaus — sequencing run | 7/12/2026 |
| bam | /data/sequencing/Vellun_shippaus/extract_28.bam | 4.1 GB | GRCh38 | #28 (DNA) | HGSC0214_recurrence2_ovary | HGSC0214 | Vellun shippaus — sequencing run | 8/2/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_28_R2.fastq.gz | 5.9 GB | — | #28 (DNA) | HGSC0214_recurrence2_ovary | HGSC0214 | Vellun shippaus — sequencing run | 6/22/2026 |
| fastq | /data/sequencing/Vellun_shippaus/extract_28_R1.fastq.gz | 3.9 GB | — | #28 (DNA) | HGSC0214_recurrence2_ovary | HGSC0214 | Vellun shippaus — sequencing run | 7/2/2026 |
| cram | /data/sequencing/Shipment_2026-Q2-001/extract_78.cram | 8.3 GB | GRCh37 | #78 (DNA) | HGSC0357_recurrence1_plasma | HGSC0357 | Shipment 2026-Q2-001 — sequencing run | 6/26/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_78_R2.fastq.gz | 4.2 GB | — | #78 (DNA) | HGSC0357_recurrence1_plasma | HGSC0357 | Shipment 2026-Q2-001 — sequencing run | 6/17/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_78_R1.fastq.gz | 6.5 GB | — | #78 (DNA) | HGSC0357_recurrence1_plasma | HGSC0357 | Shipment 2026-Q2-001 — sequencing run | 6/20/2026 |
| bam | /data/sequencing/Shipment_2026-Q2-001/extract_38.bam | 12.1 GB | GRCh37 | #38 (DNA) | HGSC0310_interval_peritoneum | HGSC0310 | Shipment 2026-Q2-001 — sequencing run | 7/2/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_38_R2.fastq.gz | 2.0 GB | — | #38 (DNA) | HGSC0310_interval_peritoneum | HGSC0310 | Shipment 2026-Q2-001 — sequencing run | 8/3/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_38_R1.fastq.gz | 2.4 GB | — | #38 (DNA) | HGSC0310_interval_peritoneum | HGSC0310 | Shipment 2026-Q2-001 — sequencing run | 6/28/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_32_R2.fastq.gz | 1.9 GB | — | #32 (DNA) | HGSC0200_interval_ovary | HGSC0200 | Shipment 2026-Q2-001 — sequencing run | 7/19/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_32_R1.fastq.gz | 6.9 GB | — | #32 (DNA) | HGSC0200_interval_ovary | HGSC0200 | Shipment 2026-Q2-001 — sequencing run | 6/16/2026 |
| cram | /data/sequencing/Shipment_2026-Q2-001/extract_10.cram | 12.8 GB | GRCh37 | #10 (DNA) | HGSC0095_diagnosis_ovary | HGSC0095 | Shipment 2026-Q2-001 — sequencing run | 7/23/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_10_R2.fastq.gz | 2.6 GB | — | #10 (DNA) | HGSC0095_diagnosis_ovary | HGSC0095 | Shipment 2026-Q2-001 — sequencing run | 7/14/2026 |
| fastq | /data/sequencing/Shipment_2026-Q2-001/extract_10_R1.fastq.gz | 3.1 GB | — | #10 (DNA) | HGSC0095_diagnosis_ovary | HGSC0095 | Shipment 2026-Q2-001 — sequencing run | 7/13/2026 |
| cram | /data/sequencing/Shipment_2026-Q1-001/extract_76.cram | 11.6 GB | GRCh37 | #76 (DNA) | HGSC0109_recurrence1_omentum | HGSC0109 | Shipment 2026-Q1-001 — sequencing run | 6/30/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_76_R2.fastq.gz | 2.5 GB | — | #76 (DNA) | HGSC0109_recurrence1_omentum | HGSC0109 | Shipment 2026-Q1-001 — sequencing run | 7/7/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_76_R1.fastq.gz | 2.0 GB | — | #76 (DNA) | HGSC0109_recurrence1_omentum | HGSC0109 | Shipment 2026-Q1-001 — sequencing run | 7/24/2026 |
| cram | /data/sequencing/Shipment_2026-Q1-001/extract_74.cram | 6.1 GB | GRCh37 | #74 (DNA) | HGSC0150_recurrence2_omentum | HGSC0150 | Shipment 2026-Q1-001 — sequencing run | 7/17/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_74_R2.fastq.gz | 6.2 GB | — | #74 (DNA) | HGSC0150_recurrence2_omentum | HGSC0150 | Shipment 2026-Q1-001 — sequencing run | 6/12/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_74_R1.fastq.gz | 3.6 GB | — | #74 (DNA) | HGSC0150_recurrence2_omentum | HGSC0150 | Shipment 2026-Q1-001 — sequencing run | 8/1/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_72_R2.fastq.gz | 6.1 GB | — | #72 (DNA) | HGSC0258_diagnosis_peritoneum | HGSC0258 | Shipment 2026-Q1-001 — sequencing run | 6/18/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_72_R1.fastq.gz | 5.2 GB | — | #72 (DNA) | HGSC0258_diagnosis_peritoneum | HGSC0258 | Shipment 2026-Q1-001 — sequencing run | 8/4/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_48_R2.fastq.gz | 2.4 GB | — | #48 (DNA) | HGSC0283_recurrence2_ascites | HGSC0283 | Shipment 2026-Q1-001 — sequencing run | 7/13/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_48_R1.fastq.gz | 6.7 GB | — | #48 (DNA) | HGSC0283_recurrence2_ascites | HGSC0283 | Shipment 2026-Q1-001 — sequencing run | 6/20/2026 |
| bam | /data/sequencing/Shipment_2026-Q1-001/extract_44.bam | 7.7 GB | GRCh37 | #44 (DNA) | HGSC0053_recurrence2_omentum | HGSC0053 | Shipment 2026-Q1-001 — sequencing run | 7/14/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_44_R2.fastq.gz | 7.4 GB | — | #44 (DNA) | HGSC0053_recurrence2_omentum | HGSC0053 | Shipment 2026-Q1-001 — sequencing run | 7/3/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_44_R1.fastq.gz | 4.5 GB | — | #44 (DNA) | HGSC0053_recurrence2_omentum | HGSC0053 | Shipment 2026-Q1-001 — sequencing run | 7/1/2026 |
| cram | /data/sequencing/Shipment_2026-Q1-001/extract_36.cram | 12.2 GB | GRCh37 | #36 (DNA) | HGSC0311_diagnosis_peritoneum | HGSC0311 | Shipment 2026-Q1-001 — sequencing run | 7/8/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_36_R2.fastq.gz | 6.6 GB | — | #36 (DNA) | HGSC0311_diagnosis_peritoneum | HGSC0311 | Shipment 2026-Q1-001 — sequencing run | 7/5/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_36_R1.fastq.gz | 2.0 GB | — | #36 (DNA) | HGSC0311_diagnosis_peritoneum | HGSC0311 | Shipment 2026-Q1-001 — sequencing run | 8/3/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_30_R2.fastq.gz | 7.3 GB | — | #30 (DNA) | HGSC0390_recurrence1_plasma | HGSC0390 | Shipment 2026-Q1-001 — sequencing run | 8/3/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_30_R1.fastq.gz | 4.6 GB | — | #30 (DNA) | HGSC0390_recurrence1_plasma | HGSC0390 | Shipment 2026-Q1-001 — sequencing run | 7/18/2026 |
| bam | /data/sequencing/Shipment_2026-Q1-001/extract_22.bam | 8.9 GB | GRCh37 | #22 (DNA) | HGSC0181_recurrence1_plasma | HGSC0181 | Shipment 2026-Q1-001 — sequencing run | 7/3/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_22_R2.fastq.gz | 6.7 GB | — | #22 (DNA) | HGSC0181_recurrence1_plasma | HGSC0181 | Shipment 2026-Q1-001 — sequencing run | 7/16/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_22_R1.fastq.gz | 2.9 GB | — | #22 (DNA) | HGSC0181_recurrence1_plasma | HGSC0181 | Shipment 2026-Q1-001 — sequencing run | 7/24/2026 |
| bam | /data/sequencing/Shipment_2026-Q1-001/extract_8.bam | 7.5 GB | GRCh37 | #8 (DNA) | HGSC0270_interval_omentum | HGSC0270 | Shipment 2026-Q1-001 — sequencing run | 7/25/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_8_R2.fastq.gz | 5.5 GB | — | #8 (DNA) | HGSC0270_interval_omentum | HGSC0270 | Shipment 2026-Q1-001 — sequencing run | 6/26/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_8_R1.fastq.gz | 3.7 GB | — | #8 (DNA) | HGSC0270_interval_omentum | HGSC0270 | Shipment 2026-Q1-001 — sequencing run | 7/14/2026 |
| bam | /data/sequencing/Shipment_2026-Q1-001/extract_2.bam | 8.0 GB | GRCh37 | #2 (DNA) | HGSC0294_recurrence1_omentum | HGSC0294 | Shipment 2026-Q1-001 — sequencing run | 7/28/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_2_R2.fastq.gz | 4.4 GB | — | #2 (DNA) | HGSC0294_recurrence1_omentum | HGSC0294 | Shipment 2026-Q1-001 — sequencing run | 6/14/2026 |
| fastq | /data/sequencing/Shipment_2026-Q1-001/extract_2_R1.fastq.gz | 2.2 GB | — | #2 (DNA) | HGSC0294_recurrence1_omentum | HGSC0294 | Shipment 2026-Q1-001 — sequencing run | 8/3/2026 |